Plotting a ROC curve with OptimalCutpoints package: changing size of legends?
I have a data like:
head(data1)
status NLR
1 1 3.547
2 1 2.723
3 0 2.228
4 0 1.903
5 0 1.870
6 1 1.515
I successfully plot a ROC curve with optimal cut-off using Youden:
library(OptimalCutpoints)
optimal.cutpoint.nlr <- optimal.cutpoints(X = "NLR", status = "status", tag.healthy = 0, methods = "Youden", data = data1, pop.prev = NULL, control = control.cutpoints(), ci.fit = FALSE, conf.level = 0.95, trace = FALSE)
plot.optimal.cutpoints(optimal.cutpoint.nlr, which = 1)
my plot
How can i arrange the size of AUC label to fit within the plot and how can i point the exact cut of value (2.336 here) instead of (0.283, 0.647)?
THANKS!!
r plot roc
add a comment |
I have a data like:
head(data1)
status NLR
1 1 3.547
2 1 2.723
3 0 2.228
4 0 1.903
5 0 1.870
6 1 1.515
I successfully plot a ROC curve with optimal cut-off using Youden:
library(OptimalCutpoints)
optimal.cutpoint.nlr <- optimal.cutpoints(X = "NLR", status = "status", tag.healthy = 0, methods = "Youden", data = data1, pop.prev = NULL, control = control.cutpoints(), ci.fit = FALSE, conf.level = 0.95, trace = FALSE)
plot.optimal.cutpoints(optimal.cutpoint.nlr, which = 1)
my plot
How can i arrange the size of AUC label to fit within the plot and how can i point the exact cut of value (2.336 here) instead of (0.283, 0.647)?
THANKS!!
r plot roc
add a comment |
I have a data like:
head(data1)
status NLR
1 1 3.547
2 1 2.723
3 0 2.228
4 0 1.903
5 0 1.870
6 1 1.515
I successfully plot a ROC curve with optimal cut-off using Youden:
library(OptimalCutpoints)
optimal.cutpoint.nlr <- optimal.cutpoints(X = "NLR", status = "status", tag.healthy = 0, methods = "Youden", data = data1, pop.prev = NULL, control = control.cutpoints(), ci.fit = FALSE, conf.level = 0.95, trace = FALSE)
plot.optimal.cutpoints(optimal.cutpoint.nlr, which = 1)
my plot
How can i arrange the size of AUC label to fit within the plot and how can i point the exact cut of value (2.336 here) instead of (0.283, 0.647)?
THANKS!!
r plot roc
I have a data like:
head(data1)
status NLR
1 1 3.547
2 1 2.723
3 0 2.228
4 0 1.903
5 0 1.870
6 1 1.515
I successfully plot a ROC curve with optimal cut-off using Youden:
library(OptimalCutpoints)
optimal.cutpoint.nlr <- optimal.cutpoints(X = "NLR", status = "status", tag.healthy = 0, methods = "Youden", data = data1, pop.prev = NULL, control = control.cutpoints(), ci.fit = FALSE, conf.level = 0.95, trace = FALSE)
plot.optimal.cutpoints(optimal.cutpoint.nlr, which = 1)
my plot
How can i arrange the size of AUC label to fit within the plot and how can i point the exact cut of value (2.336 here) instead of (0.283, 0.647)?
THANKS!!
r plot roc
r plot roc
asked Nov 12 at 13:21
Ahmet Naci Emecen
62
62
add a comment |
add a comment |
active
oldest
votes
Your Answer
StackExchange.ifUsing("editor", function () {
StackExchange.using("externalEditor", function () {
StackExchange.using("snippets", function () {
StackExchange.snippets.init();
});
});
}, "code-snippets");
StackExchange.ready(function() {
var channelOptions = {
tags: "".split(" "),
id: "1"
};
initTagRenderer("".split(" "), "".split(" "), channelOptions);
StackExchange.using("externalEditor", function() {
// Have to fire editor after snippets, if snippets enabled
if (StackExchange.settings.snippets.snippetsEnabled) {
StackExchange.using("snippets", function() {
createEditor();
});
}
else {
createEditor();
}
});
function createEditor() {
StackExchange.prepareEditor({
heartbeatType: 'answer',
autoActivateHeartbeat: false,
convertImagesToLinks: true,
noModals: true,
showLowRepImageUploadWarning: true,
reputationToPostImages: 10,
bindNavPrevention: true,
postfix: "",
imageUploader: {
brandingHtml: "Powered by u003ca class="icon-imgur-white" href="https://imgur.com/"u003eu003c/au003e",
contentPolicyHtml: "User contributions licensed under u003ca href="https://creativecommons.org/licenses/by-sa/3.0/"u003ecc by-sa 3.0 with attribution requiredu003c/au003e u003ca href="https://stackoverflow.com/legal/content-policy"u003e(content policy)u003c/au003e",
allowUrls: true
},
onDemand: true,
discardSelector: ".discard-answer"
,immediatelyShowMarkdownHelp:true
});
}
});
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f53263100%2fplotting-a-roc-curve-with-optimalcutpoints-package-changing-size-of-legends%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
active
oldest
votes
active
oldest
votes
active
oldest
votes
active
oldest
votes
Thanks for contributing an answer to Stack Overflow!
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
To learn more, see our tips on writing great answers.
Some of your past answers have not been well-received, and you're in danger of being blocked from answering.
Please pay close attention to the following guidance:
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
To learn more, see our tips on writing great answers.
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f53263100%2fplotting-a-roc-curve-with-optimalcutpoints-package-changing-size-of-legends%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown