Decompressing file as uploading to HDFS












0















I have data that I want to upload to HDFS



data folder is multi-layer, but innermost dir only contains multiple .gz files.



folder is about 250 GB compressed, and I don't know how many gz files are in there.



I want to upload this to HDFS but they should be decompressed.



Is there a way that I can achieve this with single hadoop fs -put command?
or is writing a script file decompressing one by one and uploading to hdfs the only way?










share|improve this question























  • GZ files are supported by most Hadoop processes. They just aren't splittable. -put cannot extract, though

    – cricket_007
    Nov 16 '18 at 10:10













  • yes, that is my concern. putting gz directly on hdfs is not an issue. The fact that they should be decompressed when it is on hdfs is.

    – Brandon Lee
    Nov 16 '18 at 15:08











  • You could look into adding Apache Nifi and using its ExtractFile processors

    – cricket_007
    Nov 16 '18 at 15:30


















0















I have data that I want to upload to HDFS



data folder is multi-layer, but innermost dir only contains multiple .gz files.



folder is about 250 GB compressed, and I don't know how many gz files are in there.



I want to upload this to HDFS but they should be decompressed.



Is there a way that I can achieve this with single hadoop fs -put command?
or is writing a script file decompressing one by one and uploading to hdfs the only way?










share|improve this question























  • GZ files are supported by most Hadoop processes. They just aren't splittable. -put cannot extract, though

    – cricket_007
    Nov 16 '18 at 10:10













  • yes, that is my concern. putting gz directly on hdfs is not an issue. The fact that they should be decompressed when it is on hdfs is.

    – Brandon Lee
    Nov 16 '18 at 15:08











  • You could look into adding Apache Nifi and using its ExtractFile processors

    – cricket_007
    Nov 16 '18 at 15:30
















0












0








0


1






I have data that I want to upload to HDFS



data folder is multi-layer, but innermost dir only contains multiple .gz files.



folder is about 250 GB compressed, and I don't know how many gz files are in there.



I want to upload this to HDFS but they should be decompressed.



Is there a way that I can achieve this with single hadoop fs -put command?
or is writing a script file decompressing one by one and uploading to hdfs the only way?










share|improve this question














I have data that I want to upload to HDFS



data folder is multi-layer, but innermost dir only contains multiple .gz files.



folder is about 250 GB compressed, and I don't know how many gz files are in there.



I want to upload this to HDFS but they should be decompressed.



Is there a way that I can achieve this with single hadoop fs -put command?
or is writing a script file decompressing one by one and uploading to hdfs the only way?







hadoop hdfs






share|improve this question













share|improve this question











share|improve this question




share|improve this question










asked Nov 16 '18 at 3:42









Brandon LeeBrandon Lee

676




676













  • GZ files are supported by most Hadoop processes. They just aren't splittable. -put cannot extract, though

    – cricket_007
    Nov 16 '18 at 10:10













  • yes, that is my concern. putting gz directly on hdfs is not an issue. The fact that they should be decompressed when it is on hdfs is.

    – Brandon Lee
    Nov 16 '18 at 15:08











  • You could look into adding Apache Nifi and using its ExtractFile processors

    – cricket_007
    Nov 16 '18 at 15:30





















  • GZ files are supported by most Hadoop processes. They just aren't splittable. -put cannot extract, though

    – cricket_007
    Nov 16 '18 at 10:10













  • yes, that is my concern. putting gz directly on hdfs is not an issue. The fact that they should be decompressed when it is on hdfs is.

    – Brandon Lee
    Nov 16 '18 at 15:08











  • You could look into adding Apache Nifi and using its ExtractFile processors

    – cricket_007
    Nov 16 '18 at 15:30



















GZ files are supported by most Hadoop processes. They just aren't splittable. -put cannot extract, though

– cricket_007
Nov 16 '18 at 10:10







GZ files are supported by most Hadoop processes. They just aren't splittable. -put cannot extract, though

– cricket_007
Nov 16 '18 at 10:10















yes, that is my concern. putting gz directly on hdfs is not an issue. The fact that they should be decompressed when it is on hdfs is.

– Brandon Lee
Nov 16 '18 at 15:08





yes, that is my concern. putting gz directly on hdfs is not an issue. The fact that they should be decompressed when it is on hdfs is.

– Brandon Lee
Nov 16 '18 at 15:08













You could look into adding Apache Nifi and using its ExtractFile processors

– cricket_007
Nov 16 '18 at 15:30







You could look into adding Apache Nifi and using its ExtractFile processors

– cricket_007
Nov 16 '18 at 15:30














1 Answer
1






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oldest

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0














I think you can do that only with a script file, by uncompressing each file. But you can reduce the script with a pipe, something like this:



for file in $( ls ); do
echo Uncompressing and putting $file
gunzip -c $file | hdfs dfs -put - "/hdfs-dir/$file.txt"
done





share|improve this answer
























  • ya I just created script as well

    – Brandon Lee
    Nov 23 '18 at 19:49











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1 Answer
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1 Answer
1






active

oldest

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active

oldest

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active

oldest

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0














I think you can do that only with a script file, by uncompressing each file. But you can reduce the script with a pipe, something like this:



for file in $( ls ); do
echo Uncompressing and putting $file
gunzip -c $file | hdfs dfs -put - "/hdfs-dir/$file.txt"
done





share|improve this answer
























  • ya I just created script as well

    – Brandon Lee
    Nov 23 '18 at 19:49
















0














I think you can do that only with a script file, by uncompressing each file. But you can reduce the script with a pipe, something like this:



for file in $( ls ); do
echo Uncompressing and putting $file
gunzip -c $file | hdfs dfs -put - "/hdfs-dir/$file.txt"
done





share|improve this answer
























  • ya I just created script as well

    – Brandon Lee
    Nov 23 '18 at 19:49














0












0








0







I think you can do that only with a script file, by uncompressing each file. But you can reduce the script with a pipe, something like this:



for file in $( ls ); do
echo Uncompressing and putting $file
gunzip -c $file | hdfs dfs -put - "/hdfs-dir/$file.txt"
done





share|improve this answer













I think you can do that only with a script file, by uncompressing each file. But you can reduce the script with a pipe, something like this:



for file in $( ls ); do
echo Uncompressing and putting $file
gunzip -c $file | hdfs dfs -put - "/hdfs-dir/$file.txt"
done






share|improve this answer












share|improve this answer



share|improve this answer










answered Nov 16 '18 at 17:10









Marco ReisMarco Reis

644




644













  • ya I just created script as well

    – Brandon Lee
    Nov 23 '18 at 19:49



















  • ya I just created script as well

    – Brandon Lee
    Nov 23 '18 at 19:49

















ya I just created script as well

– Brandon Lee
Nov 23 '18 at 19:49





ya I just created script as well

– Brandon Lee
Nov 23 '18 at 19:49




















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