Genetic Algorithm matlab in python with DEAP












0















I'm trying to translate a matlab function into python...
but now at some point matlab uses internal functions that I don't know how to run on python



this is the section of matlab code:



options = optimoptions(@ga,'PopulationSize',100);
[x,fval] = ga(FitnessFunction,numVar,A,b,,,lb,ub,,options);


the disp of options in matlab is:



Set properties:
PopulationSize: 100

Default properties:
ConstraintTolerance: 1.0000e-03
CreationFcn: @gacreationuniform
CrossoverFcn: @crossoverscattered
CrossoverFraction: 0.8000
Display: 'final'
EliteCount: '0.05*PopulationSize'
FitnessLimit: -Inf
FitnessScalingFcn: @fitscalingrank
FunctionTolerance: 1.0000e-06
HybridFcn:
InitialPopulationMatrix:
InitialPopulationRange:
InitialScoresMatrix:
MaxGenerations: '100*numberOfVariables'
MaxStallGenerations: 50
MaxStallTime: Inf
MaxTime: Inf
MutationFcn: {@mutationgaussian [1] [1]}
NonlinearConstraintAlgorithm: 'auglag'
OutputFcn:
PlotFcn:
PopulationType: 'doubleVector'
SelectionFcn: @selectionstochunif
UseParallel: 0
UseVectorized: 0


How do I translate this into python?
maybe using deap
thanks
thanks










share|improve this question



























    0















    I'm trying to translate a matlab function into python...
    but now at some point matlab uses internal functions that I don't know how to run on python



    this is the section of matlab code:



    options = optimoptions(@ga,'PopulationSize',100);
    [x,fval] = ga(FitnessFunction,numVar,A,b,,,lb,ub,,options);


    the disp of options in matlab is:



    Set properties:
    PopulationSize: 100

    Default properties:
    ConstraintTolerance: 1.0000e-03
    CreationFcn: @gacreationuniform
    CrossoverFcn: @crossoverscattered
    CrossoverFraction: 0.8000
    Display: 'final'
    EliteCount: '0.05*PopulationSize'
    FitnessLimit: -Inf
    FitnessScalingFcn: @fitscalingrank
    FunctionTolerance: 1.0000e-06
    HybridFcn:
    InitialPopulationMatrix:
    InitialPopulationRange:
    InitialScoresMatrix:
    MaxGenerations: '100*numberOfVariables'
    MaxStallGenerations: 50
    MaxStallTime: Inf
    MaxTime: Inf
    MutationFcn: {@mutationgaussian [1] [1]}
    NonlinearConstraintAlgorithm: 'auglag'
    OutputFcn:
    PlotFcn:
    PopulationType: 'doubleVector'
    SelectionFcn: @selectionstochunif
    UseParallel: 0
    UseVectorized: 0


    How do I translate this into python?
    maybe using deap
    thanks
    thanks










    share|improve this question

























      0












      0








      0








      I'm trying to translate a matlab function into python...
      but now at some point matlab uses internal functions that I don't know how to run on python



      this is the section of matlab code:



      options = optimoptions(@ga,'PopulationSize',100);
      [x,fval] = ga(FitnessFunction,numVar,A,b,,,lb,ub,,options);


      the disp of options in matlab is:



      Set properties:
      PopulationSize: 100

      Default properties:
      ConstraintTolerance: 1.0000e-03
      CreationFcn: @gacreationuniform
      CrossoverFcn: @crossoverscattered
      CrossoverFraction: 0.8000
      Display: 'final'
      EliteCount: '0.05*PopulationSize'
      FitnessLimit: -Inf
      FitnessScalingFcn: @fitscalingrank
      FunctionTolerance: 1.0000e-06
      HybridFcn:
      InitialPopulationMatrix:
      InitialPopulationRange:
      InitialScoresMatrix:
      MaxGenerations: '100*numberOfVariables'
      MaxStallGenerations: 50
      MaxStallTime: Inf
      MaxTime: Inf
      MutationFcn: {@mutationgaussian [1] [1]}
      NonlinearConstraintAlgorithm: 'auglag'
      OutputFcn:
      PlotFcn:
      PopulationType: 'doubleVector'
      SelectionFcn: @selectionstochunif
      UseParallel: 0
      UseVectorized: 0


      How do I translate this into python?
      maybe using deap
      thanks
      thanks










      share|improve this question














      I'm trying to translate a matlab function into python...
      but now at some point matlab uses internal functions that I don't know how to run on python



      this is the section of matlab code:



      options = optimoptions(@ga,'PopulationSize',100);
      [x,fval] = ga(FitnessFunction,numVar,A,b,,,lb,ub,,options);


      the disp of options in matlab is:



      Set properties:
      PopulationSize: 100

      Default properties:
      ConstraintTolerance: 1.0000e-03
      CreationFcn: @gacreationuniform
      CrossoverFcn: @crossoverscattered
      CrossoverFraction: 0.8000
      Display: 'final'
      EliteCount: '0.05*PopulationSize'
      FitnessLimit: -Inf
      FitnessScalingFcn: @fitscalingrank
      FunctionTolerance: 1.0000e-06
      HybridFcn:
      InitialPopulationMatrix:
      InitialPopulationRange:
      InitialScoresMatrix:
      MaxGenerations: '100*numberOfVariables'
      MaxStallGenerations: 50
      MaxStallTime: Inf
      MaxTime: Inf
      MutationFcn: {@mutationgaussian [1] [1]}
      NonlinearConstraintAlgorithm: 'auglag'
      OutputFcn:
      PlotFcn:
      PopulationType: 'doubleVector'
      SelectionFcn: @selectionstochunif
      UseParallel: 0
      UseVectorized: 0


      How do I translate this into python?
      maybe using deap
      thanks
      thanks







      python matlab deap






      share|improve this question













      share|improve this question











      share|improve this question




      share|improve this question










      asked Nov 14 '18 at 11:47









      giuseppe Di Palmagiuseppe Di Palma

      317




      317
























          0






          active

          oldest

          votes











          Your Answer






          StackExchange.ifUsing("editor", function () {
          StackExchange.using("externalEditor", function () {
          StackExchange.using("snippets", function () {
          StackExchange.snippets.init();
          });
          });
          }, "code-snippets");

          StackExchange.ready(function() {
          var channelOptions = {
          tags: "".split(" "),
          id: "1"
          };
          initTagRenderer("".split(" "), "".split(" "), channelOptions);

          StackExchange.using("externalEditor", function() {
          // Have to fire editor after snippets, if snippets enabled
          if (StackExchange.settings.snippets.snippetsEnabled) {
          StackExchange.using("snippets", function() {
          createEditor();
          });
          }
          else {
          createEditor();
          }
          });

          function createEditor() {
          StackExchange.prepareEditor({
          heartbeatType: 'answer',
          autoActivateHeartbeat: false,
          convertImagesToLinks: true,
          noModals: true,
          showLowRepImageUploadWarning: true,
          reputationToPostImages: 10,
          bindNavPrevention: true,
          postfix: "",
          imageUploader: {
          brandingHtml: "Powered by u003ca class="icon-imgur-white" href="https://imgur.com/"u003eu003c/au003e",
          contentPolicyHtml: "User contributions licensed under u003ca href="https://creativecommons.org/licenses/by-sa/3.0/"u003ecc by-sa 3.0 with attribution requiredu003c/au003e u003ca href="https://stackoverflow.com/legal/content-policy"u003e(content policy)u003c/au003e",
          allowUrls: true
          },
          onDemand: true,
          discardSelector: ".discard-answer"
          ,immediatelyShowMarkdownHelp:true
          });


          }
          });














          draft saved

          draft discarded


















          StackExchange.ready(
          function () {
          StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f53299516%2fgenetic-algorithm-matlab-in-python-with-deap%23new-answer', 'question_page');
          }
          );

          Post as a guest















          Required, but never shown

























          0






          active

          oldest

          votes








          0






          active

          oldest

          votes









          active

          oldest

          votes






          active

          oldest

          votes
















          draft saved

          draft discarded




















































          Thanks for contributing an answer to Stack Overflow!


          • Please be sure to answer the question. Provide details and share your research!

          But avoid



          • Asking for help, clarification, or responding to other answers.

          • Making statements based on opinion; back them up with references or personal experience.


          To learn more, see our tips on writing great answers.




          draft saved


          draft discarded














          StackExchange.ready(
          function () {
          StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f53299516%2fgenetic-algorithm-matlab-in-python-with-deap%23new-answer', 'question_page');
          }
          );

          Post as a guest















          Required, but never shown





















































          Required, but never shown














          Required, but never shown












          Required, but never shown







          Required, but never shown

































          Required, but never shown














          Required, but never shown












          Required, but never shown







          Required, but never shown







          Popular posts from this blog

          Xamarin.iOS Cant Deploy on Iphone

          Glorious Revolution

          Dulmage-Mendelsohn matrix decomposition in Python