Installing bedtools with conda (Windows)












1















I have been trying to install bedtools in Anaconda2 environment in Windows 10 and I got this error for these 3 channels. Anybody knows what is happening and why I can not install it.



Thanks in advanced



(py36) C:UsersUser>conda install -c bioconda bedtools  
(py36) C:UsersUser>conda install -c cgat bedtools
(py36) C:UsersUser>conda install -c biobuilds bedtools

Solving environment: failed
PackagesNotFoundError: The following packages are not available from current channels: - bedtools
Current channels:
- https://conda.anaconda.org/bioconda/win-64
- https://conda.anaconda.org/bioconda/noarch
- https://conda.anaconda.org/conda-forge/win-64
- https://conda.anaconda.org/conda-forge/noarch
- https://repo.anaconda.com/pkgs/main/win-64
- https://repo.anaconda.com/pkgs/main/noarch
- https://repo.anaconda.com/pkgs/free/win-64
- https://repo.anaconda.com/pkgs/free/noarch
- https://repo.anaconda.com/pkgs/r/win-64
- https://repo.anaconda.com/pkgs/r/noarch
- https://repo.anaconda.com/pkgs/pro/win-64
- https://repo.anaconda.com/pkgs/pro/noarch
- https://repo.anaconda.com/pkgs/msys2/win-64
- https://repo.anaconda.com/pkgs/msys2/noarch
- https://conda.anaconda.org/cgat/win-64
- https://conda.anaconda.org/cgat/noarch
- https://conda.anaconda.org/biobuilds/win-64
- https://conda.anaconda.org/biobuilds/noarch

To search for alternate channels that may provide the conda package you're looking for,
navigate to https://anaconda.org and use the search bar at the top of the page.









share|improve this question



























    1















    I have been trying to install bedtools in Anaconda2 environment in Windows 10 and I got this error for these 3 channels. Anybody knows what is happening and why I can not install it.



    Thanks in advanced



    (py36) C:UsersUser>conda install -c bioconda bedtools  
    (py36) C:UsersUser>conda install -c cgat bedtools
    (py36) C:UsersUser>conda install -c biobuilds bedtools

    Solving environment: failed
    PackagesNotFoundError: The following packages are not available from current channels: - bedtools
    Current channels:
    - https://conda.anaconda.org/bioconda/win-64
    - https://conda.anaconda.org/bioconda/noarch
    - https://conda.anaconda.org/conda-forge/win-64
    - https://conda.anaconda.org/conda-forge/noarch
    - https://repo.anaconda.com/pkgs/main/win-64
    - https://repo.anaconda.com/pkgs/main/noarch
    - https://repo.anaconda.com/pkgs/free/win-64
    - https://repo.anaconda.com/pkgs/free/noarch
    - https://repo.anaconda.com/pkgs/r/win-64
    - https://repo.anaconda.com/pkgs/r/noarch
    - https://repo.anaconda.com/pkgs/pro/win-64
    - https://repo.anaconda.com/pkgs/pro/noarch
    - https://repo.anaconda.com/pkgs/msys2/win-64
    - https://repo.anaconda.com/pkgs/msys2/noarch
    - https://conda.anaconda.org/cgat/win-64
    - https://conda.anaconda.org/cgat/noarch
    - https://conda.anaconda.org/biobuilds/win-64
    - https://conda.anaconda.org/biobuilds/noarch

    To search for alternate channels that may provide the conda package you're looking for,
    navigate to https://anaconda.org and use the search bar at the top of the page.









    share|improve this question

























      1












      1








      1








      I have been trying to install bedtools in Anaconda2 environment in Windows 10 and I got this error for these 3 channels. Anybody knows what is happening and why I can not install it.



      Thanks in advanced



      (py36) C:UsersUser>conda install -c bioconda bedtools  
      (py36) C:UsersUser>conda install -c cgat bedtools
      (py36) C:UsersUser>conda install -c biobuilds bedtools

      Solving environment: failed
      PackagesNotFoundError: The following packages are not available from current channels: - bedtools
      Current channels:
      - https://conda.anaconda.org/bioconda/win-64
      - https://conda.anaconda.org/bioconda/noarch
      - https://conda.anaconda.org/conda-forge/win-64
      - https://conda.anaconda.org/conda-forge/noarch
      - https://repo.anaconda.com/pkgs/main/win-64
      - https://repo.anaconda.com/pkgs/main/noarch
      - https://repo.anaconda.com/pkgs/free/win-64
      - https://repo.anaconda.com/pkgs/free/noarch
      - https://repo.anaconda.com/pkgs/r/win-64
      - https://repo.anaconda.com/pkgs/r/noarch
      - https://repo.anaconda.com/pkgs/pro/win-64
      - https://repo.anaconda.com/pkgs/pro/noarch
      - https://repo.anaconda.com/pkgs/msys2/win-64
      - https://repo.anaconda.com/pkgs/msys2/noarch
      - https://conda.anaconda.org/cgat/win-64
      - https://conda.anaconda.org/cgat/noarch
      - https://conda.anaconda.org/biobuilds/win-64
      - https://conda.anaconda.org/biobuilds/noarch

      To search for alternate channels that may provide the conda package you're looking for,
      navigate to https://anaconda.org and use the search bar at the top of the page.









      share|improve this question














      I have been trying to install bedtools in Anaconda2 environment in Windows 10 and I got this error for these 3 channels. Anybody knows what is happening and why I can not install it.



      Thanks in advanced



      (py36) C:UsersUser>conda install -c bioconda bedtools  
      (py36) C:UsersUser>conda install -c cgat bedtools
      (py36) C:UsersUser>conda install -c biobuilds bedtools

      Solving environment: failed
      PackagesNotFoundError: The following packages are not available from current channels: - bedtools
      Current channels:
      - https://conda.anaconda.org/bioconda/win-64
      - https://conda.anaconda.org/bioconda/noarch
      - https://conda.anaconda.org/conda-forge/win-64
      - https://conda.anaconda.org/conda-forge/noarch
      - https://repo.anaconda.com/pkgs/main/win-64
      - https://repo.anaconda.com/pkgs/main/noarch
      - https://repo.anaconda.com/pkgs/free/win-64
      - https://repo.anaconda.com/pkgs/free/noarch
      - https://repo.anaconda.com/pkgs/r/win-64
      - https://repo.anaconda.com/pkgs/r/noarch
      - https://repo.anaconda.com/pkgs/pro/win-64
      - https://repo.anaconda.com/pkgs/pro/noarch
      - https://repo.anaconda.com/pkgs/msys2/win-64
      - https://repo.anaconda.com/pkgs/msys2/noarch
      - https://conda.anaconda.org/cgat/win-64
      - https://conda.anaconda.org/cgat/noarch
      - https://conda.anaconda.org/biobuilds/win-64
      - https://conda.anaconda.org/biobuilds/noarch

      To search for alternate channels that may provide the conda package you're looking for,
      navigate to https://anaconda.org and use the search bar at the top of the page.






      python-3.x anaconda






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      asked Nov 15 '18 at 14:04









      Malj90Malj90

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